Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MLTFHNVCSVPSSFWLTGIPGLESLHVWLSIPFGSMYLVAVVGNVTILAVVKIERSLHQPMYFFLCML-----AAIDLVLSTSTIPKLLGIFWFGACD---------IGLDACLGQMFLIHCFATVESGIFLAMAFDRYVAICNPLRHSMVLTYTVVGRLGLVSLLRGVLYIGPLPLMIRLRLPLYKTHVISHSYCEHMAVVALTCGDSRVNNVYGL----SIGFLVLILDSVAIAASYVMIFRAVM--GLATPEARLKTLGTCASHLCAILIFYVPIAVSSLIHRFGQCVPPPVHTLLANFYLLIPPILNPIVYAVRTKQIRESLLQIPRIEMKIR-- |
| 4CFP Chain:A ((15-341)) | DTNGFDILMGQFAHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRAIIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLKNRLKSRSNG----LRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVD--ESLILAIMQTQSSFNPYAVSRSDALGLMQVVQHTAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAMLNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLTTRH--------------PSAESRRYLYKVNTAQKSYRRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -304943 for 2378 contacts (-128.2/contact) +
2D Compatibility (PS) -29618 + (NN) 9995 + (LL) 2212
1D Compatibility (HY) 5200 + (ID) 2450
Total energy: -319604.0 ( -134.40 by residue)
QMean score : 0.216
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