Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MEEENATLLTEFVLTGFLYQ--------PQWKIPLFLAFLVIYLITIMGNLGLIAVIW-----KDPHLHIPMYLLLGNLAFVDAWIS---------STVTPKMLNNFLAKSKMISLSECKIQFFSIAIGVTTECFLLATMAYDRYVAICKPLLYPA--IMT-------NGLCIRLLILSYIAGILHALIHEGFLFRLTFCNSNIVHHIYCDTIPLSKISCTDSSINFLMVFIFSGSIQVFSIVTILISYTFVLFTVLEKKSDKGVRKAFSTCGAHLFSV----------CLYYGPLLLMYVGPASPQADGQNMVEPLFYTVIIPLLNPIIYSLRNKQVIVSFIKMLKRNVKVSY |
| 3FEH Chain:A ((13-375)) | NLYFQGKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPD-RKFLFACETESDQREWVAAFQKAVDRPM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FEH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -287980 for 2252 contacts (-127.9/contact) +
2D Compatibility (PS) -32649 + (NN) 2901 + (LL) 176
1D Compatibility (HY) 6000 + (ID) 1800
Total energy: -313352.0 ( -139.14 by residue)
QMean score : 0.138
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