Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLQKLM-EPEAGTNRTAVAEFILLGL----VQTEEMQPVVFVLLLF----AYLVTTGG--NLSILAAVLVEPK----LHA---PMYFFLGNLSVLDVGCITVTVPAML---------GRLLSHKSTISYDACLSQL-FFFHLLAGMDCFLLTAMAYDRLLAICQPLTYSTRMSQTVQRMLVAASLACAFTN------------------------ALTHTVAMSTLNFCGPNEVNHFYCDLPQLFQLSC----SSTQLNELLLFAVGFIMAGTPLVLIITAYSHVAAA-----VLRIRSVEGRKKAFSTCGSHLTVVCLFFGRGIFNYMRLGSEEASDKDKGVGVFNTV--INPM--LNPLIYSLRNPDVQGALWQIFLGRRSLT |
| 1YT3 Chain:A ((1-375)) | MNYQMITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVW-YLLPITAKLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQTLPEDALPQPMLNLMDMPGYRKAFKAIKSLITDVSETHK--------ISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -246341 for 2169 contacts (-113.6/contact) +
2D Compatibility (PS) -31197 + (NN) -1767 + (LL) 736
1D Compatibility (HY) -13600 + (ID) 3300
Total energy: -295469.0 ( -136.22 by residue)
QMean score : 0.177
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