Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------META-NY--------------TKVTEFVLTGLSQTREVQLVLFVIFLS-----------FYLFILPG-NILIICTIR--------LDPHLTSPMYFLLANLALLDIW-YSSIT-AP-KMLIDFFVERKIISFGGCIAQLFF--LHFVGASEMFLL-TVMAYDRYAAICRPLHYATIMNRRLCCILVALSW---------------MGGFIHSIIQVALIVRLPFCGPNELDSYFCDITQVVR-------IACANTFP-EELVMI-CS----------------------------SGLISVVCFI-----ALLMS-----YAFLLALLKKHSGSGENTNRAMSTCY-----------------------------SHITIVVLMF-GPSIYIYARPFDSFSLDKVVSVFHTVIFP-LLNPIIYTLRNKEVKAAMRK-VVTKYILCEEK |
4OWT Chain:A ((1-466)) | GGRLLLSTSLDAKDELEERLERCMSIVTSMTAGVSEREANDALNAYVCKGLPQHEEICLGLFTLILTEPAQAQKCYRDLALVSRDGMNIVLNKINQILMEKYLKLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTAKNIWLAESVLDILTEQREWVLKSSILIAMAVYTYLRLIVDHHGTAQLQALRQKEVDFCISLLRERFMECLMIGRDLVRLLQNVARIPEFELLWKDIIHNPQALSPQFTGILQLLQSRTSRKFLACRLTPDMETKLLFMTSRVRFGQQKRYQDWFQRQYLSTPDSQSLRCDLIRYICGVVHPSNEVLSSDILPRWAIIGWLLTTCTSNVAASNAKLALFYDWLFFSPDKDSIMNIEPAILVMHHSMKPHPAITATLLDFMCRIIPNFYPPLEGHVRQGVFSSLNHIVEKRVLAHLAPLFDNPKLDKELRAMLREKFPEFCS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OWT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139698 for 1787 contacts (-78.2/contact) +
2D Compatibility (PS) -28922 + (NN) 5809 + (LL) 144
1D Compatibility (HY) 11600 + (ID) 900
Total energy: -151967.0 ( -85.04 by residue)
QMean score : -0.055
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