Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARENHSLAAEFILIGFTNYPELKTLLFVVFSAIYLVTMVGNLG---------------LVALIYVERRLLTPMYIFL--------GNLALMDSCCSCAVTPKMLENFFSEDRIISLYECMAQFYFLCLAETTDCFLLATMAYDRYVAICHPLQYHTMMSKTLCIRMTTGAFKAGNLHSMIHVGLLLRLTFCRSNKIHHFFCDILPLYRLSCTDPSINELMIYIFSIPIQIFTIATVLISYLCILLTVFKMKSKEGRGKAFSTCASHFLSVSIFYICLLMYIGPSEEGDKDTPVAIFYAIVIPLLNPFIYSLRNKEVINVLKK-IMRNYNILKQTCSIANLFLIY-------- |
| 3MK7 Chain:C ((1-303)) | ---MSTFWSGYIALLTLGTIVALFWLIFATRKGESAGTTDQTMGHAFDGIEEYDNPLPRWWFLLFIGTLVFGILYLVLYPGLGNWKGVLPGYEGGWT-QEKQWEREVAQADEKYGPIFAKYAAMSVEEVAQDPQAVKMGARLFANYCSICHG---SDAKGSLGFPNLADQDWRWGGDAASIKTSILNGRI------------AAMPAWGQAIGEEGVKNVAAFVRKDLA--------------------GLPLPEGTDADLSAGKNVYAQT------CAVCHGQGGEGMAA-----LGAPKLNSAAGWIYGSSLGQLQQTIRHGRNGQMPAQQQYLGDDKVHLLAAYVYSLSQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -197407 for 1731 contacts (-114.0/contact) +
2D Compatibility (PS) -27353 + (NN) -1742 + (LL) 5572
1D Compatibility (HY) -4000 + (ID) 1650
Total energy: -226580.0 ( -130.90 by residue)
QMean score : 0.116
|
|
|