Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MLMNYSSATEFYLLGFPGSEELHHILFAIFFFFYLVTLMGN-------TVIIMIVCVDKRLQSPMYFFLGHLSALEILVTTIIVPVMLWGLLLPGMQTIYL-----SACVVQLFLYLAVGTTEFALLGAMAVDRYVAVCNPLRYNIIMNRHTCNFVVL-VSWVFGFLFQIW----PVYVM---------FQLTYCKSNVVNNFFCDRGQLLKLSCNNTLFTEFILFLMAVFVLFGSLIPTIVSNAYIISTILKIPSSSGRRKSFSTCASHFTCVVIGYGSCLFLYVKPKQTQAADYNWVVSLMVSVVTPFLNPFIFTLRNDKVIEALRDGVKRCCQLFRN--------------------- |
| 4TNW Chain:A ((1-342)) | SDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESWIDKRLS----YGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHND---GTVLYSVRISLVLS-----CPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQLTN-TSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSW-----VSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQL----PPVSYIKAIDVWIGACMTFIFCALLEFALVNHIANAGTTEWNDISKRVDLISRALFPVLFFVFNILYWSRFGHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -286584 for 1983 contacts (-144.5/contact) +
2D Compatibility (PS) -29961 + (NN) 8697 + (LL) 2344
1D Compatibility (HY) -8800 + (ID) 2150
Total energy: -316454.0 ( -159.58 by residue)
QMean score : 0.066
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