Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDMADEPLNGSHTWLSIPFDLNGSVVSTNTSNQTEPYYDLTSNAVLTFIYFVVCIIGLCGNTLVIYVILRYAKMKTITNIYILNLAIADELF-MLGLPFLAMQVALVHWPFGKAICRVVMTVDGINQFTSIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLLV-ILPIMIYAGLRSNQWGRSSCTINWPGESG-AWYTGFIIYTFILGFLVPLTIICLCYLFIIIKVKSSGIRVG-SSKRKKS------EKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSMAISPTPALKGMFDFVVVLTYANSCANPILYAFLSDNFKKSFQNVLCLVKVSGTDDGERSDSKQDKSRLNETTETQRTLLNGDLQTSI |
2Y02 Chain:B ((11-299)) | ------------------------------------------EAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMH-WWRDEDPQALKCYQD-PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNW---LGYANSAMNPIIYC-RSPDFRKAFKRLLA----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223635 for 2041 contacts (-109.6/contact) +
2D Compatibility (PS) -27580 + (NN) 2319 + (LL) 4008
1D Compatibility (HY) -26800 + (ID) 4650
Total energy: -276338.0 ( -135.39 by residue)
QMean score : 0.267
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