Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSCVKLWPSGAPAPLVSIEELE-NQELVGKGGFGTVFRAQHR--KWGYDVAVKIVNS----KAISREVKAMASLDNEFVLRLEGVIEKVNWDQDPKPALVTKFMENGSLSGLLQSQCPRPWPLLCRLLKEVVLGMFYLHDQNPVLLHRDLKPSNVLLDPELHVKLADFGLSTFQGGSQSG-TGSGEPGGTLGYLAPELFVNVNRKASTASDVYSFGILMWAVLA-GREVELPTEPSLVYEAVCNRQNRPSLAELPQAGPETPGLEGLKELMQLCWSSEPKDRPSFQECLPKTDEVFQMVENNMNAAVSTVKDFLSQLRSSNRRFSIPESGQGGTEMDGFRRTIENQHSRNDVMVSEWLNKLNLEEPPSSVPKKCPSLTKRSRAQEEQVPQAWTAGTSSDSMAQPPQTPETSTFRNQMPSPTSTGTPSPGPRGNQGAERQGMNWSCRTPEPNPVTGRPLVNIYNCSGVQVGDNNYLTMQQTTALPTWGLAPSGKGRGLQHPPPVGSQEGPKDPEAWSRPQGWYNHSGK |
| 4FYO Chain:A ((12-283)) | --------------YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKIL--PALKDELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA----KWPVKWYAPECINY--YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM-LEKGERMGC---PAGCP-----REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEGHH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132312 for 2052 contacts (-64.5/contact) +
2D Compatibility (PS) -27091 + (NN) -12886 + (LL) 7524
1D Compatibility (HY) -19600 + (ID) 3950
Total energy: -188315.0 ( -91.77 by residue)
QMean score : 0.492
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