Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTCGVVASNLAPCIGYLRNGGKVPDPCCKGVGALNNAAKTTKDRRDACNCIKTTATQIGGVNAANAAALPGFCRVNIPYKISTSTNCASIK
M049 Chain:A ((1-123))
LTCGVVASNLAPCIGYLRNGGKVPDPCCKGVGALNNAAKTTKDRRDACNCIKTTATQIGGVNAANAAALPGFCRVNIPYKISTSTNCASIK
General information:
TITO was launched using:
RESULT:
Template:
M049.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64014 for 669 contacts (-95.7/contact) +
2D Compatibility (PS) -9132 + (NN) -59 + (LL) 0
1D Compatibility (HY) -11200 + (ID) 4550
Total energy: -88955.0 ( -132.97 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_M049.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M049-query.scw
PDB file :
Tito_Scwrl_M049.pdb
: