Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APSAAECKEERRLAINACKPVVYGKDPSPACCERARVTHIECVCPVITPKLAALIDVNRAVRLIEGCGRKVPRHYKCGSITTP
M049 Chain:A ((3-130))
APSAAECKEERRLAINACKPVVYGKDPSPACCERARVTHIECVCPVITPKLAALIDVNRAVRLIEGCGRKVPRHYKCGSITTP
General information:
TITO was launched using:
RESULT:
Template:
M049.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 18732 for 580 contacts (32.3/contact) +
2D Compatibility (PS) -8257 + (NN) -2184 + (LL) 0
1D Compatibility (HY) 4800 + (ID) 200
Total energy: 12891.0 ( 22.23 by residue)
QMean score : 0.082
(partial model without unconserved sides chains):
PDB file :
Tito_M049.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M049-query.scw
PDB file :
Tito_Scwrl_M049.pdb
: