Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------MSNFCKIIYGNNDNQLSEKSYKSSVCNDDLFNGNEEDFVILENEKMYKTKAEFESEGYKII---------------------------------------------------------------------------------------------------------- |
| 4OMH Chain:A ((13-292)) | IGRSSVRPYLEECTRRFQEMFDRHVVTRPTKVELTDAELREVIDDCNAAVAPLGKTVSDERWISYVGVVLWSQSPRHIKDMEAFKAVCVLNCVTFVWDDMDPALHDFGLFLPQLRKICEKYYGPEDAEVAYEAARALVTSDHMFRDSPIKAALCTTSPEQYFRFRVTDIGVDFWMKMSYPIYRHPEFTEHAKTSLAARMTTRGLTIVNDFYSYDREVSLGQITNCFRLCDVSDETAFKEFFQARLDDMIEDIECIKAFDQLTQDVFLDLIYGNFVWTTSN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OMH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14385 for 338 contacts (42.6/contact) +
2D Compatibility (PS) -6310 + (NN) -212 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 400
Total energy: 4263.0 ( 12.61 by residue)
QMean score : -0.023
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