Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDWLLVSILSIIFVLLILSFLFSGAEIGLTSVSRSRVNKLKLDGNKRAKIIDHLLNKKELTIGTILLGNTIINITCSVLFTAIFINLFGNESVFLSTIVMTFCILLFCEVLPKTYAMQNPEKFTSFSAYFVLFFVKIFSPLTLGIQFIVNFILKLCGFHKNREAISAADAMRNMIALHRSEGTMLQQDLDMLSSILDLAETEISEIMTHRRNLFSLDIDRNKEELIKEILTSSHSRVPLWQKELDNIVGVVHVKNLINALREKDNKIEEVDIAQVMSKPCFLPESTPLSVQLHNFRKNRKHLAFVIDEYGALQGIVTLEDILEEIVGEISDEHDLITENFIKKMSDNVYHIEGKSTIRDINRQLHWDLPDEEATTLAGMIVNEIERIPDEGEEFSMFGFYFRILKKDKNIITVIEVQVKTDNTVTAID |
| 3NQR Chain:A ((3-124)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDA---EAFSMDKVLRTAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NQR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66160 for 849 contacts (-77.9/contact) +
2D Compatibility (PS) -12599 + (NN) 1623 + (LL) 25648
1D Compatibility (HY) -14400 + (ID) 2100
Total energy: -67988.0 ( -80.08 by residue)
QMean score : 0.474
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