Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAHCYIKKLKLSNFRNHLNFELDSDDS-SVVIIGKNGIGKTNILEAISLLAKSNGMKKAKASEMQNRFSNKDWAVHYDFFNGADLNSIGIAKSFNKKLIQIGGKMQSSYSSLYRISNVIWLIPQMDYILLNSPSDRLKFLDRIVSLFEENYACYYMRYRKAKRERGRLLRENILNKSWLSSLENIMAVNAVNILDMRLSVLKMLQDTINSYSTQFFPKVSLKFNSQLTLSDTAKYFQNRLRENREKDSLTGRITFCVNNDKFQVFCQRRDLPINLCSTGEQKLLLLSIILSSVKARCIHYNKAPLLLLDDIMSHLDKYYRKVLIEEMLSI----RCQAWITDVDQNNFGNYIDYFKTIEL |
| 3WMG Chain:A ((368-566)) | ----------------VLRGISLTIPNGKTVAIVGGSGAGKSTIIQLLMRFYDIEP----QG----------------------------------GGLLLFDGTPA-WNYDFHALRSQIGLVSQEPVLFSGTIRDNILYGKRDAT---------------------------------------------------------------------------------------DEEVIQALREANAYSFVMAL----PDGLDTEVGERG-----LALSGGQKQRIAIARAILK---------HPTLLCLDESTSALDAESEALVQEALDRMMASDGVTSVVIAHRLSTVA-RADLILVMQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WMG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53388 for 1444 contacts (-37.0/contact) +
2D Compatibility (PS) -20574 + (NN) -3665 + (LL) 12280
1D Compatibility (HY) -5200 + (ID) 1500
Total energy: -72047.0 ( -49.89 by residue)
QMean score : 0.294
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