Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSGNVLLTFCSNSGYLRSDMNAVKNLVIWLLIIVITAMFIDSQKDRLRNRFLSTFLPYRGRIQDSRSVEFTKSYDGHFYIQAQVNG--HNITFLLDTGATDIVLSQKDALYAGIKLQDIQDFKIYETAKGQIRAGVVQIPQIKIGNFLINDVQASVNTH----SMPHSLLGMSFLKYFHFTIRGNKLILYCNSTY |
1WKR Chain:A ((3-110)) | ------------------------------------------------------------------GSVPAT-NQLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGADKSYVKTSTSSATSDKVSVTYGSGSFSG-TEYTDTVTLGSLTIPKQSIGVASRDSGFDGVDGILGVGPVDLTVGTLSPHTSTSIPTVTD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1WKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -47953 for 735 contacts (-65.2/contact) +
2D Compatibility (PS) -10904 + (NN) 913 + (LL) 4924
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -57420.0 ( -78.12 by residue)
QMean score : 0.434
|
|
|