Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIITIFGPPGSGKGTQSSLLIERYNLKLISVGDLLRNIISSGSELGKKIKDTVESGNLIQDGVICELLYDQL-ALMDDNFLFDGFPRNLNQAHFLTQILRERYNRDVDIVIELQLNDKVAIDRLKNRLVCLDCKSVYSTSSFKD---DNNLVCTRCKSARLEKRIDDSDLSAIDRRIGEYHVQVK---SLREYYRDK-------LLMIDANLNVDQVKQEIESKISCSLV
3L0S Chain:C ((1-223))
MNILIFGPNGSGKGTQGNLVKDKYSLAHIESGGIFREHIGGGTELGKKAKEFIDRGDLVPDDITIPMVLETLESKGKDGWLLDGFPRNTVQAQKLFEALQEK-GMKINFVIEILLPREVAKNRIMGRRICKNNPN-HPNNIFIEAIKPNGDVCRVCGGA-LSARADDQDEGAINKRHDIYYNTVDGTLAAAYYYKNMAAKEGFVYIELDGEGSIDSIKDTLLAQLA----
General information:
TITO was launched using:
RESULT:
Template:
3L0S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90565 for 1527 contacts (-59.3/contact) +
2D Compatibility (PS) -22524 + (NN) -6846 + (LL) 780
1D Compatibility (HY) -12000 + (ID) 3700
Total energy: -134855.0 ( -88.31 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3L0S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L0S-query.scw
PDB file :
Tito_Scwrl_3L0S.pdb
: