Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNRKDLLSVLDFTVNDVGNIIELAGQYLE--NKAANGRILENKTVINLFFEDSTRTLTSFEMAAKSLGANVVTLP-VKSSSINKGEDLTDMIKTLNAMNPDYIVVRQKSSGIVNMLAKHVSCLLINAGDGSSEHPTQALADYFVISSHKKQIKNLKIVICGDILHSRVARSNIRLLKMF-GAKICLVAP-----PTLICKHFPEVDSIYY---SLIEGIKDADVIMLLRLQKERMNSGCFIPSNREYFYLYG-LDSQKLLCAKSNAIVMHPGPINRGIEISSDITD---HIILQQVEFGLAIRKAVLHYYRPC |
2RGW Chain:F ((2-296)) | ----KHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYA-DIIVLRHPSEGAARLASEYSQVPIINAG----QHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERF------PDPNEYEKVKGSYKIKREYVEGKKFIIMHPLP--RVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIED |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RGW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212991 for 2153 contacts (-98.9/contact) +
2D Compatibility (PS) -29838 + (NN) -9847 + (LL) -8
1D Compatibility (HY) -19600 + (ID) 4800
Total energy: -277084.0 ( -128.70 by residue)
QMean score : 0.589
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