Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTRFAPSPTGYLHVGNARTALVCWMYTRSQNGKFLLRFDDTDLQRSDVKHIDSIVQDLRWICIDWDVI---------FKQSERFKHYNEVFLQLITKGHIYACYETKEELDIKRKLQLKHGLPPVYDRSALLLTEQEKFCYEQEGRKPHFRFKLDRNEVVKWNDEVKGEINIATSSISDPVVKREDGIYTYMLPSVIDDVDFNVTHVIRGEDHVTNTAVQIQMIQALEAKVPVFAHLPLLHFDDS-KISKRKGGLDIKSIKENEIEPMALASYLIKLGTSDPIEAYVNMQSLIDSFDIKKFGSASAQFNLSEIHKLNSKVLQQMPFEMVKERLSQ------------IGVNSPEFWYFIRNNIEKFSEVAEWWQICKSNIEPVV-----------LDKEFIKIVLDALP-QGDCNENTLSEWVKAIQQTVDIKLKDLFMQLRLALTGAKTGPELAKLLIFIGKENIIARLKKY |
| 3AFH Chain:A ((26-481)) | VRVRFAPSPTGHLHVGGARTALFNWMFARKEGGKFILRIEDTDTERSSREYEQQILESLRWCGLDWDEGPDIGGDFGPYRQSERLEIYREYAEKLVEDKRAYYVVYDKEDPSKELFT----T--YEYPHEY-----------KEKGHPVTIKFKVLP-GKTSFEDLLKGYMEFDNSTLEDFIIMKSNGFPTYNFAVVVDDHLMRISHVFRGEDHLSNTPKQLMIYEAFGWEAPVFMHIPLILGSDRTPLSKRHGATSVEHFRREGILSRALMNYLALLGWRVEGDEIFTIEEKLQSFDPKDISNKGVIFDYQKLEWVNGKHMRRIDLEDLKREFIEWAKYAGKEIPSVDERYFSETLRICREKVNTLSQLYDIMYPFMNDDYEYEKDYVEKFLKREEAERVLEEAKKAFKDLNSWNMEEIEKTLRDLSEKGLASKKVVFQLIRGAVTGKLVTPGLFETIEVLGKERTLKRLERT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242122 for 3303 contacts (-73.3/contact) +
2D Compatibility (PS) -44564 + (NN) -14078 + (LL) 1612
1D Compatibility (HY) -22400 + (ID) 5900
Total energy: -327452.0 ( -99.14 by residue)
QMean score : 0.519
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