Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLAKGKEMGKLEGKIALIAGASGGMGSAVAKRFVREGAYVILISRSIDNLKQLYDEIEKLDEFKE---GSVKLIQLDLLDFENVKILANMIESLKLSESGALDILVACTGILGKLN-----LVHDC------------ELEELQNVMNTNFTANWYLLKNLDPVLKK-SNSGRVIFMTSEVTLSPSSYPYWVPYAASKAALEIMVKIYASETKHTK--LCVNAVYSEGPVDSEMYKQAFPG-KDISELIL----------PNKLTDKFVELASEDCS--ISGQVLPLSKSLE----- |
| 1AE1 Chain:A ((16-273)) | --------RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSR---NEKELDECLEIWREK--GLN--VEGSVCDLLS--------------------RTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFT-EKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFS-ALPSVS-LYSASKGAINQMTKSLAC-EWAK-DNIRVNSVAP-GVIL----------QKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFP-AASYITGQIIWADGGFTANGGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AE1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149152 for 1595 contacts (-93.5/contact) +
2D Compatibility (PS) -22309 + (NN) -11290 + (LL) 3012
1D Compatibility (HY) -7600 + (ID) 2900
Total energy: -190239.0 ( -119.27 by residue)
QMean score : 0.558
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