Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLSKITIASDA---VNVIIEISANAEPVKYEFDKELGLLRVDRFLSTAMVYPCNYGFVPNTCAGDGDPVDVLVLTQFPLAPGVLISVRPVGALLTKDEKGKDEKVLAVPVSSVDSYYDHVKNCSDLPKNLLDKITHFFLHYKDLEKEKTVTVGEWVDAEKAKKIVESAIKSRN
3FQ3 Chain:A ((22-192))
MNIDAISIGSNPPEDVNVIIEVPVGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSEDGDPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPEITLKQIAHFFEHYKDLEPGKWVKIGDWGDEDYARKFIVEAIERAK
General information:
TITO was launched using:
RESULT:
Template:
3FQ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105348 for 1266 contacts (-83.2/contact) +
2D Compatibility (PS) -17947 + (NN) -4581 + (LL) 0
1D Compatibility (HY) -18000 + (ID) 4200
Total energy: -150076.0 ( -118.54 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_3FQ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FQ3-query.scw
PDB file :
Tito_Scwrl_3FQ3.pdb
: