Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIQSILRLLYITAVLTRYNISPYLLSPSRKSINRIRGYKLRCAFEKLGPVFIKFGQSISSRTDILNEDITNNLLLICDKLPSFSHKIAVKTIESEFNCKLSDIFSSFSEKPIAAASISQAHKATTTEGKEVAVKILRPNIEKTFSKDIKMLFWLAGIVEKFSKQSRRLKPIELVETFAEICRLELDLRFEAAHSSELRENTKNDRGFYVPEVDWSRTSKRVLTLEWIGATPVYEVEKLN--------NHKQIAINLIESFCNQVYRDCFFHADMHPGNLMIDSNNSIVALDCGIMGRIDRETCYYVIEILKGFLNRDYDRVAKVHFRAGYVSPQHKSFVTACRAIGEPIIGQPIQKISFASLLAQLLK-ITGDFDMKVQTQLLLLQKTMILLEGTCRKIYPEINVWKVVEAWTENQHKNKISYKERIKSSYPVKTIQEIFNLIEKLNLIANQKLENIQIKDRSNGKIYFLLWSMVIALIVKLLIFL |
1FMK Chain:A ((270-513)) | ------------------------------------------------------------------------------------------------------------EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-----------------------------------------PEAFLQEAQVMKKLR----HEKLVQLYAVVS--EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG-MAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-----------------------------FPIKWTAPEA---------ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-----ERGY--RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGENL----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56172 for 1737 contacts (-32.3/contact) +
2D Compatibility (PS) -23758 + (NN) -12983 + (LL) 19276
1D Compatibility (HY) -6000 + (ID) 1650
Total energy: -81287.0 ( -46.80 by residue)
QMean score : 0.317
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