Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRQSTKKALLIPFVIMIITAIVLMGVWFIFNSLIALIASIVLVVMIIVSIILFRQALMKMDSYVDGLSAQISTTNNKAIKHLPIGIIVLDENDHIEWVNQFMTNHMEANVISESVNEVFPNILKQLDRVKSVEIEYNQYHFQVRYSENDHCLYFFDITEQVQTNELYENSKPIIATLFLDNYDEITQNMNDTQRSEINSMVTRVISRWATEYNIFFKRYSSDQFVAYLNQKILADLEESKFDILSQLREKSVGYRAQLTLSIGVGEGTENLIDLGELSQSGLDLALGRGGDQVAIKSINGNVRFYGGKTDPMEKRTRVRARVISHALKDILAEGDKVIIMGHKRPDLDAIGAAIGVSRFAMMNNLEAYIVLNETDIDPTLRRVMNEIDKKSELRERFITSDDAWDMMTSKTTVVIVDTHKPELVLDENVLNKANRKVVIDHHRRGESFISNPLLIYMEPYASSTAELVTELLEYQPTEQRLTRLESTVMYAGIIVDTRNFTL-RTGSRTFDAASYLRAH---GADTILTQHFLKDDVDTYINRSELI----RTVKVEDNGIAIAHGSDDKIYHPVTVAQAADELLSLEGIEASY--VVARREDNLIGISARSLGSVNVQLTMEALGGGGHLTNAATQLKGV--TVEEAIAQLQQAITEQLSRSEDA |
| 1K20 Chain:A ((1-310)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKILVFGHQNPDSDAIGSSYAFAYLAREAYGLDTEAVALGEPNEETAFVLDYFGVAAPRVITSAKAEGA-------EQVILTDHNEFQQSVAD--IAEVEVYGVVDHHRVANFETANPLYMRLEP-VGSASSIVYRMFKEH--SVAVSKEIAGLMLSGLISDTLLLKSPTTHPTDKAIAPELAELAGVNLEEYGLAMLKAGTNLASKSAEELIDIDAKTFELNGNNVRVAQVNTVDIAEVLERQAEIEAAIEKAIADNGYSDFVLMITDIINSNSEILAIGSNMDKVEAAFNF--VLENNHAFLAGAVSRKKQVVPQLTESFNA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87194 for 2612 contacts (-33.4/contact) +
2D Compatibility (PS) -32129 + (NN) -10310 + (LL) 28216
1D Compatibility (HY) -5600 + (ID) 2650
Total energy: -109667.0 ( -41.99 by residue)
QMean score : 0.375
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