Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDNLSLFIDYINDNIIYGSEIKREKLENLFNQFAIKNVEKNIVYDELKSL----DITIIESQDSYKNKLKRLFSVLLQSKKI-----------------------
2DBH Chain:A ((1-102))
-GSSGSSGSSALSRN---GSFITKEKKDTVLRQVRLDPCDLQPIFDDMLHFLNPEELRVIEEIPQAEDKLDRLFEIIGVKSQEASQTLLDSVYSHLPDLLSGPSSG
General information:
TITO was launched using:
RESULT:
Template:
2DBH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1657 for 411 contacts (-4.0/contact) +
2D Compatibility (PS) -8035 + (NN) -3651 + (LL) 708
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -17035.0 ( -41.45 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_2DBH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DBH-query.scw
PDB file :
Tito_Scwrl_2DBH.pdb
: