Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMCKLEWDDEINFGKISFLSHSHIPDRKTGLELAEKYGIDGVMIGSGIFHNPFAFEKEPREHTSKELLDLLRLHLSLFNKYEKDEIRQFKSLRRFFKIYVRGIRALANFDIN
3L5A Chain:A ((318-362))
--------------RIPLIASGGINSPESALDALQ--HADMVGMSSPFVTEPDFVHKLAEQ---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3L5A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9545 for 234 contacts (-40.8/contact) +
2D Compatibility (PS) -5176 + (NN) -5043 + (LL) 5656
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -16908.0 ( -72.26 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_3L5A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L5A-query.scw
PDB file :
Tito_Scwrl_3L5A.pdb
: