Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKHYQIVIIGGGTAGVTVASRLLRKNQNLKEKIAIIDPADHHYYQPLWTLVGAGVSSLKSSRKDMESVIPEGANW-IKQAVSSFQPENNSVIL---GDNTVVYYDFLVVAPGLQINWSSIKGLKENIGKNGVCSNYSPDYVNETWNQISNFKQGNAIFTHPNTPIKCGGAPMKIMYLAEDYFRKHKIRSNANVIYATPKDALFDV---GKYNKELERIVEERNITVNYNYNLVEIDGDKKVATFEHIKAYDRKTISYDMLHVTPPMGPL-DVVKESTLS-DSEGWVDVNPTTLQHKSYSNVFALGDASNVPT--------SKTGAAIRKQAPIVANNLLQVMNNQMLTHHYDGYTSCPIVTGYNRLILAEFDYNKNTKETMPFNQAKERRSMYIFKKDLLPKMYWYGMLKGLI |
| 3OC4 Chain:A ((3-314)) | ----LKIVIIGASFAGISAAIASR--KKYPQAEISLIDKQATVGYLSG-------------RYITEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQT----EKLLKYKFLS----AVPL----------LENSQTVAVIGAGPIGMEA--IDFLVKMK----KTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLET----SEQEISCDSGIFALNLHPQLAYLDK-KIQRNLDQTIAVDA-YLQ-TSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEK------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157615 for 2190 contacts (-72.0/contact) +
2D Compatibility (PS) -30194 + (NN) -14287 + (LL) 7848
1D Compatibility (HY) -13600 + (ID) 2750
Total energy: -210598.0 ( -96.16 by residue)
QMean score : 0.470
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