Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTK-----EEELESAL--LKADFIVHLAGVNRPE-----HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--------------------DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPN--YNSVIATFCYKIAR-----NEEIQ-VNDRNVELTLNYVDDIVAEIKRAIEGTP-------TIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKDLYSTYLSYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRGQVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVNEMFDPNQPDTYFLEV |
| 1E6U Chain:A ((4-267)) | QRVFIAGHRGMVGSAIRRQLEQRG-DVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYK------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102677 for 1604 contacts (-64.0/contact) +
2D Compatibility (PS) -23305 + (NN) -7904 + (LL) 7920
1D Compatibility (HY) -8800 + (ID) 1750
Total energy: -136516.0 ( -85.11 by residue)
QMean score : 0.550
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