Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MKKLTAAAIATMGFATFTMAHQA--DAAETTNTQQAHTLMSTQSQDVSYGTYYTIDSNGDYHHTPDGNWNQAMF-DNKEYSYTFVDAQGHTHYFYNCYPKNANANGSGQTY------VNPATAGDNNDYTASQSQQHINQYGYQSNVGPDASYYSHSNNNQAYNSHDGNGKVNYPNGTSNQNGGSASKATASGHAKDASWLTSRKQLQPYGQYHGGGAHYGVDYAMPENSPVYSLTDGTVVQAGWSNYGGGNQVTIKEANSNNYQWYMHNNRLTVSAGDKVKAGDQIAYSGSTGNSTAPHVHFQRMSGGIGNQYAVDPTSYLQSR |
| 2GU1 Chain:A ((7-331)) | RIHYMVKVGDTLSGIFAQLGVPYSILQKILSVDLDHLQLDMIQPGEELELMMDDMGQLSRLIYHMSIVEKAIYTRENDGSFSYDFQEISGEWREILFSGEINGSFSVSARRVGLTSSQVANITQVMKDKIDFSRSLRADRFDILVKQQYLGEHNTGNSEIKAISFKLAKGDVSAFLAEDGR----FYDRAGNSLERAFNRYPVDKAYRQITSGFNPKRKHPV--TGRVVPHNGTDFATPIGAPVYSTGDGKVIVVRKHP-YAGNYLVIE-HNSVYKTRYLHLDKILVKKGQLVKRGQKIALAGATGRLTGPHLHFEVLVRN----RPVDAMKADLP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GU1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24195 for 2254 contacts (10.7/contact) +
2D Compatibility (PS) -31194 + (NN) -10169 + (LL) 320
1D Compatibility (HY) -5200 + (ID) 2600
Total energy: -24648.0 ( -10.94 by residue)
QMean score : 0.256
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