Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLHGQQVKIGYGDNTIINKLDVEIPDGKVTSIIGPNGCGKSTLLKALS--RLLAVKEGEVFLDGENIHTQSTKEIAKKIAILP-QSPEVADGLTVGELVSYGRFPHQKGFGRL--TAEDKKEIDWAMEVTGTD-TFRHRSIND-LSGGQRQRVWIAMALAQRTDIIFLDEPTTYLDICHQLEILELVQK-LNQEQGCTI-VMVLHDINQAIRF--SDHLIAMKEGDIIATGSTEDVLTQEILEKVFNIDVVLSKDPKTGKPLLVTYDLCRRAYS |
| 2D2F Chain:A ((17-235)) | ----------------TILKGVNLVVPKGEVHALMGPNGAGKSTLGKILAGDPEYTVERGEILLDGENILELSPDERARKGLFLAFQYPVEVPGVTIANFL---RLALQAKLGREVGVAEFWTKVKKALELLDWDESYLSRYLNEGFSGGEKKRNEILQLLVLEPTYAVLDETDSGLDI----DALKVVARGVNAMRGPNFGALVITHYQRILNYIQPDKVHVMMDGRVVATGGPELALELE---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77527 for 1517 contacts (-51.1/contact) +
2D Compatibility (PS) -22900 + (NN) -10869 + (LL) 3276
1D Compatibility (HY) -14000 + (ID) 3550
Total energy: -125570.0 ( -82.78 by residue)
QMean score : 0.450
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