Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASTLEIKDLHVSIEDK----EILKGVNLTINTDEIHAIMGPNGTGKSTLSSAIMGHPSYEVTKGEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGENFGALMITHYQRLLNYITPDKVHVMYAGKVVKSGGPELAKRLEEEGYEWVKEEFGSAE------------------------------- |
2PJZ Chain:A ((1-261)) | ---MIQLKNVGITLSGKGYERFSLENINLEVN-GEKVIILGPNGSGKTTLLRAISGLLPYS---GNIFINGMEVRKIRNYIRYST--NLPEAYEIGVTVNDIVYLYEELKGLD------------RDLFLEMLKALKLGEEILRRKLYK-LSAGQSVLVRTSLALASQPEIVGLDEPFENVDAARRHVISRYIKEYGKEG---ILVTHELDMLNLYKEYKAYFLVGNRLQGPISVSELL--ESSIVEGERNDALLVLDIMDKKVSIVKGDLGMKFGALGSLNRIYGII |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95260 for 1780 contacts (-53.5/contact) +
2D Compatibility (PS) -22856 + (NN) 4404 + (LL) 2016
1D Compatibility (HY) -9600 + (ID) 2350
Total energy: -123646.0 ( -69.46 by residue)
QMean score : 0.480
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