Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRQARPEDRFDIAKLVYMVWDDMELELVKHLPKDMVLDAIEKSCVDATYRTFYQHILVYEVENKVAGCIISYSGENELKYEKAWELLDLPEEIKQYGTPLPVKEAKDDEYYIETIATFAAYRGRGIATKLLTSLLES---NTHVKWSLNCDINNEAALKLYKKVGFISDGQIELYKHMYHHLIVK
2FE7 Chain:A ((4-143))
EIRPAVPADAEQILAFIIELADYERA-RHEV--VTDVEGIRRSLFAEG----SPTRALMCLSEGRPIGYAVFFYSYST--------------------------WLGRNGIYLEDLYVTPEYR--GAGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGALPQDEW-------------
General information:
TITO was launched using:
RESULT:
Template:
2FE7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79630 for 894 contacts (-89.1/contact) +
2D Compatibility (PS) -14180 + (NN) -4429 + (LL) 3804
1D Compatibility (HY) -2800 + (ID) 1200
Total energy: -98435.0 ( -110.11 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_2FE7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FE7-query.scw
PDB file :
Tito_Scwrl_2FE7.pdb
: