Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMKDIIRDGHPTLRQKAAELELPLTKEEKETLIAMREFLVNSQDEEIAKRYGLRSGVGLAAPQINISKRMIAVLIPDDGSGKSYDYMLVNPKIVSHSVQEAYLPTGEGCLSVDDNVAGLVHRHNRITIKAKDIEGNDIQLRLKGYPAIVFQHEIDHLNGVMFYDHIDKNHPLQPHTDAVEV
3M6P Chain:A ((41-147))
---------------------------------------------------------GIGLSAPQVGLNVQLM-VFNPAGEPGEGKEIVLVNPKIKKYS--DKLVPFDEGCLSFPGIYAEVV-RPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRM---------------
General information:
TITO was launched using:
RESULT:
Template:
3M6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54485 for 746 contacts (-73.0/contact) +
2D Compatibility (PS) -11585 + (NN) -3646 + (LL) 6116
1D Compatibility (HY) -13200 + (ID) 2200
Total energy: -79000.0 ( -105.90 by residue)
QMean score : 0.282
(partial model without unconserved sides chains):
PDB file :
Tito_3M6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M6P-query.scw
PDB file :
Tito_Scwrl_3M6P.pdb
: