Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKP---IVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVITVGEES-GLIGAKELNSELLDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLGQV------DEITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTVEQSYPGFKINDNEAVVKIAQESARNLGLSANTIISGGGSDGSIINTFGIPSVILGVGY-EKIHTTNERMPIKSLNLLASQVLEIIKIVARQSK |
| 3CT9 Chain:A ((9-356)) | --MTAEAVSLLKSLISIPSISREETQAADFLQNYIEAEGMQTGR-K--------GNNVWCLSPMFD--LKKPTILLNSHIDTVKPV-----FTPREEN-GKLYGLGS----NDAGASVVSLLQVFLQLCRTS-QNYNLIYLASCEEEVSGKEGIESVLPGLPPVSFAIVGEPTE--MQPAIAEKGLMVLDVTATGKAGHAARDE-GDNAIYKVLNDIAWFRDYRFEKESPLLGPVKMSVTVINAGTQHNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIACDAKAR----SF----RLNSSRIDEKHPFVQKAVKM----GRIP--FGSPTLSDQALM---SFASVKIGPGRSSRSHTAEEYIMLKEIEEAIGIYLDLLDGLKL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104025 for 2732 contacts (-38.1/contact) +
2D Compatibility (PS) -35771 + (NN) -14695 + (LL) 2620
1D Compatibility (HY) -11200 + (ID) 3100
Total energy: -166171.0 ( -60.82 by residue)
QMean score : 0.406
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