Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQINLPTHPILIQTAQYNLIIDAGIGNGKLSEK----Q----LRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFIAPNIRSK--STYWDKNKGDY---SNKLILF--EK-HFEPVPGIKMQH-SGGHSFGHTIITIESQ-GDKAVHMGDIFPTTAHKNPLWV-TAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENYFAVKYSDDGENIDAYILRETLVDNN |
| 2R2D Chain:A ((3-267)) | -----NKLFVLDLGEIRVDENFIIANSTF--VTPQKPTVSSRLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEY------FGKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDREQFASL--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119764 for 2050 contacts (-58.4/contact) +
2D Compatibility (PS) -26727 + (NN) -5934 + (LL) 1644
1D Compatibility (HY) -8800 + (ID) 2350
Total energy: -161931.0 ( -78.99 by residue)
QMean score : 0.420
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