Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEIESIEHELEESIASLRQAGIRITPQRQAILRYLISSHTHPTADEIYQALSPDFPNISVATIYNNLRVFKDIGIVKELTYGDSSS---RFDFNTHNHYHIICEQCGKIVDFQYPQLNEIERLAQHMTDFDVTHHRMEIYGVCKECQDK---
4MTE Chain:A ((4-152))
-----TTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISAYDLLDLLREAEPQAKPPTVYRALDFLLEQGFVHKVESTNSYVLCHLFDQPTHTSAMFICDRCGAVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLCAACVEVEAC
General information:
TITO was launched using:
RESULT:
Template:
4MTE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57926 for 941 contacts (-61.6/contact) +
2D Compatibility (PS) -15792 + (NN) -4505 + (LL) 680
1D Compatibility (HY) -6400 + (ID) 1650
Total energy: -85593.0 ( -90.96 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_4MTE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MTE-query.scw
PDB file :
Tito_Scwrl_4MTE.pdb
: