Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------MKKTLLASSLAVGL----------------GIVAGNAGHEAHASEADLNKAS----LAQMAQ---------SNDQTLNQKPIEAGAYNYTFDYEGFTY-HFESDGTHFAWNYHA---TGANGANMSAQAPATNNVEPSAVQANQVQSQEVEAPQNAQTQ------QPQASTSNNSQVTATPTESKASEGSSVNVNAHLKQI---AQRESGGNIHAVNPTSGAAGKYQFLQSTWDSVAPAKYKGVSPANAPESVQDAAAVKLYNTGGAGHWVTA- |
4KXR Chain:C ((8-298)) | TDITVNVDGFWMLQALLDIRHVAPELRCRPYVHPGMAVMREQGIVVNDAVNEQVAARMKVLAAPDLEVVALLSRGKLLYGVIDDENQPPGSRDIPDNEFRVVLARRGQHWVSAVRVGNDITVDDVTVSDSASIAALVMDGLESIHHADPAAINAVNVPMEEMLEATKSWQESGFNVFSGGDLRRMGISAATVAALGQALSDPAAEVAVYARQYRDDAKGPSASVLSLKDGSGGRIALYQQAREAWLAICPA----------TPQLVQVGVKTVLDTLPYGEWKTHS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 38266 for 1624 contacts (23.6/contact) +
2D Compatibility (PS) -23316 + (NN) -554 + (LL) 280
1D Compatibility (HY) -5600 + (ID) 1800
Total energy: 7276.0 ( 4.48 by residue)
QMean score : 0.153
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