Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MNILVIGANGGVGSLLVQQLAKENVPFTA---------GVRQSDQLNALKSQGMKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIASKEANIKHYVMVSTYDSRRQAFDDSGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAA--------GSGKIEAAQYFDGKGE-----IPREDVATVLKEIVTSNHFNHQEFQIISGEQDI--KDALTQFEIEKD------------------------------------------------------------------------ |
| 1QYC Chain:A ((2-308)) | GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDD--HASLVEAVKNVDVVISTVG-----------SLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPAGVEASQLYPDVKYTTVDEYLSNFV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84830 for 1521 contacts (-55.8/contact) +
2D Compatibility (PS) -22986 + (NN) -9110 + (LL) -288
1D Compatibility (HY) -6000 + (ID) 1850
Total energy: -125064.0 ( -82.22 by residue)
QMean score : 0.510
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