Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIRHIRNATAVIEYGGKRILIDPMLSDKGSFDPFPNSPRQDQKNPLVELP--------------MAIEDIINDIDLVILTHLHIDHFDP--KAIEVLPKDIKIYAQNEED-----ASEVERYGFTNVSVFNDVTHIGEIELIKTDAQHGHGEILKMTGHVHGMILKHSEEPTLYLAADTVWFEGVEKALKTYQPDVVVLNGGANQFFEGGPLVMDEHDVLKVANTLPLAQIVVVHMEAVNHWHLSRKELNEFINSNDLGNRVVVPNDGELLTFEK |
| 3G1P Chain:A ((2-250)) | -------SLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGLHDLADRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGCDDLFKHPGLLDFSHTVEPFVVFDLQGLQVTPLPLNHSK--------LTFGYLLETAHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHI---------SHQFDAWLMENALPSGFEVGFDGMEIG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81621 for 1816 contacts (-44.9/contact) +
2D Compatibility (PS) -23666 + (NN) 1654 + (LL) 2296
1D Compatibility (HY) -6800 + (ID) 1800
Total energy: -109937.0 ( -60.54 by residue)
QMean score : 0.398
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