Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAINIIEYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIEHNYLNS-GGQFWLAINNHQNIVGTIGLIRL-----DNNMSALKKMFVDKGYRNLKIGKKLLDKVIMTCKEQ-NIDGIYLGTIDKFISAQYFYSNNGFREIKRGDLPSSFPKLDVDNRFYYRNLKD
3DSB Chain:A ((5-148))
ELIEIREARMDDLDTIAKFNYNLAKETEGKELDMD--VLTKGVKALLLDERKGKYHVYTVF-DKVVAQIMYTYEWSDWRNGNFLWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDENIVGMRLYVEKENINAKATYESLNMYECDYN----------------------
General information:
TITO was launched using:
RESULT:
Template:
3DSB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54522 for 907 contacts (-60.1/contact) +
2D Compatibility (PS) -14743 + (NN) -3770 + (LL) 784
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -78851.0 ( -86.94 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_3DSB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DSB-query.scw
PDB file :
Tito_Scwrl_3DSB.pdb
: