Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKIAMANFKSAMPVFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNAFLHFTLGAQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRVLLKESPSFLKEKFDFFKGKNFKIVYCIGEDLTTREKG--FRAVKEFLSEQLENIDLNYSNLIVAYEPIWAIGTKKSASLEDIYLTHGFLKQILNQKTP--------LLYGGSVNAQNAKEILGIDSVDGLLIGSASLELENFKTIISFL
4FF7 Chain:B ((58-239))
----------------------------------------------------QVTVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILSIGETLEEKKAGKTLDVVERQLNAVLEEVK-DWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINSRN
General information:
TITO was launched using:
RESULT:
Template:
4FF7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72043 for 1289 contacts (-55.9/contact) +
2D Compatibility (PS) -18136 + (NN) -5708 + (LL) 4452
1D Compatibility (HY) -11200 + (ID) 3350
Total energy: -105985.0 ( -82.22 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_4FF7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FF7-query.scw
PDB file :
Tito_Scwrl_4FF7.pdb
: