Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQFHSSSALITPFKKDLSVDEAAYETLIKRQIFQGMDACVPVGTTGESATLTHKEHMRCIEIAIETCKSTKTPSNSRMKVLAGVGSNATSESLSLAKFAQKIGADAILCVSPYYNRPTQQGLFEHYKTIAQSVEIPVMLYDVPSRTGVSIEVPTALKLFREVPNIKAIKEASGSLKRVTE-LHYYEKDFKIFSGEDSLNHSIMFSGGCGVISVTGNLMPNLISQMVNCALKFEYQQALEIQNKLFDLHQALFVETNPIPIKMAMHLAGLIENPSYRLPLVAPSKETIKLLEKTLQQYEVIA
3S8H Chain:B ((5-292))----SMVALVTPFDAQGRLDWDSLAKLVDFHLQDGTNAIVAVGTTGESATLDVEEH-------IQVVRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDM-LPETVERLSKVPNIIGIKEATGDLQRAKEVIERVGKDFLVYSGDDATAVELMLLGGKGNISVTANVAPRAMSDLCAAAMRGDAAAARAINDRLMPLHKALFIESNPIPVKWALHEMGLIPE-GIRLPLTWLSPHCHDPLRQAMRQTGVLA


General information:
TITO was launched using:
RESULT:

Template: 3S8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163721 for 2563 contacts (-63.9/contact) +
2D Compatibility (PS) -31284 + (NN) -17352 + (LL) 1488
1D Compatibility (HY) -22000 + (ID) 5950
Total energy: -238819.0 ( -93.18 by residue)
QMean score : 0.480

(partial model without unconserved sides chains):
PDB file : Tito_3S8H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3S8H-query.scw
PDB file : Tito_Scwrl_3S8H.pdb: