Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNAFKAFALLIVFFSNALLAQDLKIAAAANLTRALKALVKEFQKEHPKDAINISFNSSGKLYAQIAQNAPFDLFISADIARPKKLYDEKITPFKEEVYAKGVLVLWSENLKMDSLEILKDPKIKRIAMANPKLAPYGKASMEVLDRLK---LTPSLKSKIIYGASISQAHQ---------FIATKNAQIGFGALSLIDKKDKNLSYFIIDKTLYNPIEQ-------ALIITKNGANNPLAKVFKDFLFSPKARAIFKEYGYIVD---------------- |
| 4ECF Chain:A ((2-261)) | ------AGESITAVGSTAL-------------QPLVEAAGEQYTGEHLGTFINVQGGGTGTGLSQIQEG-AVQIGNSDLFAGEQKGINARQLV-DHRVAVVGITPIVNKKVGVKNLSTNQLIKIFTGQITNWKEVGGADQSIVLINRAQGSGTRATFEQFGLANHRSKTAQEQDSSGMVRSIVATTPGAISYVAFSYVNKTVQALSLNHVAPTEVNVTTNDWRIWSYEHLYTKGHPTGLTKAFITYVQSPAIQNTLVRQLGYLSPDQMLVERDANGHITKT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ECF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112952 for 1830 contacts (-61.7/contact) +
2D Compatibility (PS) -23104 + (NN) -1849 + (LL) 2288
1D Compatibility (HY) -5200 + (ID) 1950
Total energy: -142767.0 ( -78.01 by residue)
QMean score : 0.328
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