Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRCRVYYEDTDSEGVVYHANYLKYCERARSEFFFKQNVL---PENEEGVFVIRSIKADFFTPASLGQVLEIRTQIKELRKVFVVLFQEIYCIQNASLEPMKPFKVFASEIKFGFVNRSTYSPIAIPKLFKELLSAV
1Z54 Chain:A ((6-129))
-RIKVRYAETDQMGVVHHSVYAVYLEAARVDFLERAGLPYHRVEARGVFFPVVELGLTFRAPARFGEVVEVRTRLAELSSRALLFRYRVERE---------GVLLAEGFTRHLCQV--GERAARIPEDIYRALSVL
General information:
TITO was launched using:
RESULT:
Template:
1Z54.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92795 for 832 contacts (-111.5/contact) +
2D Compatibility (PS) -12545 + (NN) 1804 + (LL) 848
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -109038.0 ( -131.06 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_1Z54.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z54-query.scw
PDB file :
Tito_Scwrl_1Z54.pdb
: