Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHKFEGLTQIFQKAYEHEQHISESINNIVDHAIKSKDHATFNFLQWYVAEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKGIAKSRKS
3BVE Chain:C ((15-180))
MLSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHKFEGLTQIFQKAYEHEQHISESINNIVDHAIKSKDHATFNFLQWYVAEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKGIAKSRK-
General information:
TITO was launched using:
RESULT:
Template:
3BVE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85950 for 1253 contacts (-68.6/contact) +
2D Compatibility (PS) -18038 + (NN) -10372 + (LL) -28
1D Compatibility (HY) -24000 + (ID) 8300
Total energy: -146688.0 ( -117.07 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_3BVE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BVE-query.scw
PDB file :
Tito_Scwrl_3BVE.pdb
: