Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MKKALKILSVG----ALLFVAL--NAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKM-PEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAIKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH---------------- |
| 4GBA Chain:A ((6-G)) | QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWNMFLNFTQVIGP-DLSNYSEDEAWPSLFDTFVEWEMERRKRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29667 for 967 contacts (30.7/contact) +
2D Compatibility (PS) -16845 + (NN) -16793 + (LL) 64
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -9657.0 ( -9.99 by residue)
QMean score : 0.433
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