Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSHYIELTEENFESTIKK--GVALVDFWAPWCGPCKMLSPVIDELASEYEGKAKICKVNTDEQEELSAKFGIRSIPTLLFTKDGEVVHQLVGVQTKVALKEQLNKLLG
2EIQ Chain:B ((5-107))
----IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAACKVGALSKGQLKEFLDANL-
General information:
TITO was launched using:
RESULT:
Template:
2EIQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74206 for 733 contacts (-101.2/contact) +
2D Compatibility (PS) -10634 + (NN) -2722 + (LL) 144
1D Compatibility (HY) -8800 + (ID) 2550
Total energy: -98768.0 ( -134.74 by residue)
QMean score : 0.730
(partial model without unconserved sides chains):
PDB file :
Tito_2EIQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EIQ-query.scw
PDB file :
Tito_Scwrl_2EIQ.pdb
: