Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MT-NFEKIIAQNRLKTNAVLTTYCAIFAFIGLLVDAIRINANDLGIALFKLMTFQIFPTITIVMFVVAFVIILVCIQNFSSIMLSGDEYKLIDPSKVLSSKENQIHRLLLELLEEAKLHFEPKLYIINAPYMNAFASGWDESNSLIALTSALIERLDRDELKAVIAHELSHIRHNDIRLTMCVGILSNIMLLVANFSVYFFMGNRKNSGANLARMILWVLQIILPFLTLLLQMY-LSRTREYMADSGAAFLMHDNKPMIRALQKISNDYTNNDYKEIDKNSTRSAAYLFNAEMFSTHPSIKNRIQSLRKRVI |
| 3C8C Chain:A ((1-240)) | SLRSMVSDSVDEIVDGVSKTTAEVINGRKSIAQYATSLIENNPE----------PDNVRTIISQPLIKNTFLLVGFGLEKDGSNINN-------DPSWNPGPTWDPRVRPWYKDAKNAGKL------VITAPYADS------ASGEILVSVATPVKDSATGQFLGSIFYDVS---------------LAELAELVNE---------VKLFDAGYVFIVSEDGTTIAHPKKEFNGKPMSEFLGESKINVDTHQVIINGKPYAVSFSDVEG------------EDWYVGVVIDEEIAYAALDELRRS--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198288 for 1853 contacts (-107.0/contact) +
2D Compatibility (PS) -24705 + (NN) -3362 + (LL) 5288
1D Compatibility (HY) 4800 + (ID) 1300
Total energy: -217567.0 ( -117.41 by residue)
QMean score : 0.141
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