Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFAYSE-----PCLDEEDKKAVLEVLNSKQLTQGKYSLLFEEALCEFLGVKHALAFNSATSALLTLYRNFSDFNADRNEIITTPISFVATANMLLESGYTPVFAEVKNDG-NIDELALEKLITKKTKAIVSVDYAGKSVEIESIQRLCKKYSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITT-AEGGAVVTNNSELYEKMKLFRSHGMLKKDFFEGEVKSVGYNFRLNEIQSALGLSQLKKAPLLRQKREEVALIYDEIFKDNPYFTPLHPLLKHQSSNHLYPILMHQKFFTCKKLILESLHKLGILVQVHY-KPIYQYQLYQQLFNTAPLKSAEDFYSAEISLPCHANLDLESVQNIAHGVLKTFEGFNRMGFI |
| 3NYT Chain:A ((1-359)) | --MIEFIDLKNQQARIKDKIDAGIQRVLRHGQYILGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALG-V-GPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAIIPVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQDR----RYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD-----NRESVQASLKAAGVPTAVHYPIPLNKQPAVAD--EKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTN----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173689 for 3107 contacts (-55.9/contact) +
2D Compatibility (PS) -37849 + (NN) -15741 + (LL) 1676
1D Compatibility (HY) -12800 + (ID) 4400
Total energy: -242803.0 ( -78.15 by residue)
QMean score : 0.508
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