Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKCEKRVFDSLPSTQTYLLEKLKSNKLKAPVLVLAKNQSAGIGSRGNIWEIVESALTFSLALNASDL-PKDLPMQASALYLGFLFKEVLKELGSQTWLKWPNDLYL----GDQKIGGVMVNVYKGMRVCGIGVNRVSTKWACLDIGASDDWIIESFLKKIEENLFWGEVLSKYALEFHRSNSFNFHNDWGEAVSLKDAELLEDGRICIKGKIYDRM
2EJ9 Chain:A ((8-126))
----------EIDSTNDYAKELAKEGK--RNFIVLADKQNNGKGRWGRVWYSDEGGLYFSMVLDSKLYNPKVINLLVPICIIEVLKNYVDKELG----LKFPNDIMVKVNDNYKKLGGILTELTDDYMIIGIGINVNNQIRNEIREIAISLKEITGKELDKVEILSNFLKTFESYLEKLKNKEIDDYEILKKYKKYSITIGKQVKILLSNNEIITGK
General information:
TITO was launched using:
RESULT:
Template:
2EJ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53589 for 791 contacts (-67.7/contact) +
2D Compatibility (PS) -12309 + (NN) -5038 + (LL) 1448
1D Compatibility (HY) -10400 + (ID) 1950
Total energy: -81838.0 ( -103.46 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_2EJ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EJ9-query.scw
PDB file :
Tito_Scwrl_2EJ9.pdb
: