Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKIELLAKFTQIALPNSHPLLKKVLNYAKKHFSQCHMLSSSLLILNDTECFKKNYLLNWVYHALECAHEKDISMHSLEEILQKSHLPIRIKIMAQNTLLEKIEVKVLTFGAEYALFITKHPIAKRFLRQKFSGCVFLETQDELHIRGDSERFWELIVTLNENRIVHNACLDFIYPNGFGKDSYTTMAERKLKECYKALGFIKHENFSEVKKRYLELAKTYHPDLCDLKEKKALYAKRFAIIQEAYSHIKKHA |
| 2CTP Chain:A ((5-62)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA----PGATEAFKAIGTAYAVLSNPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CTP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25876 for 352 contacts (-73.5/contact) +
2D Compatibility (PS) -6188 + (NN) -3841 + (LL) 16492
1D Compatibility (HY) -800 + (ID) 750
Total energy: -20963.0 ( -59.55 by residue)
QMean score : 0.616
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