Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLETSSHFLKSFRLKRYIGFLLISLALLITPFVRIDGAHLFLISFEHKQLHFLGKIFSAEELQILPFMVILLFIGIFFITTSLGRVWCGWACPQTFLRVLYRDVIETKIFKLHKKISNKQESPKNTPSYKIRKALSVLLFAPVVAGLMMLFFFYFIAPEDFFMYLKNPSDHPIAMGFWLFSALVVLFDIVVVAERFCIYLCPYARVQSVLYDNDTLNPIYDEKRGGVLYDNQGRLFPLPPKKRSAENECVNCLHCVQVCPTHIDIRK-G---------LQLECINC-LECVDACTITMAKYNRPSLIQWSSTNAINTRQKVRLVRLKTIAYMGVIAVVVALLIITSFKKERMLLDINRNSDLYEIRSSGYVDNDYVFLFHNTDNKDHEFYFKILGQKDIQIKKPLNPIAIKAGQKIKAVVILRKPLKGNATEYKHAKDALIPITIQAYSVDDKNITIERESVFIVPSED |
1SJ1 Chain:A ((6-64)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDQDTCIGDAICASLCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEEA--------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SJ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30709 for 267 contacts (-115.0/contact) +
2D Compatibility (PS) -4762 + (NN) -7 + (LL) 33660
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -4768.0 ( -17.86 by residue)
QMean score : 0.626
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