Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYKNGENRIYAVNDEGVEVGEVTFVPTGEDMFIIDHTGVDDAARGQGIAQELVKRAVEKAKSEGKKIVPLCP----FAKAEFSKKPEYQEVEASK
1Y7R Chain:A ((40-120))
--------FTVTLYDKDRLIGMGRVIGDGGTVFQIVDIAVLKSYQGQAYGSLIMEHIMKYIKNVSVESVYVSLIADYPADKLYVKFG-FM------
General information:
TITO was launched using:
RESULT:
Template:
1Y7R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15713 for 482 contacts (-32.6/contact) +
2D Compatibility (PS) -8892 + (NN) -10167 + (LL) 924
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -38448.0 ( -79.77 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_1Y7R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y7R-query.scw
PDB file :
Tito_Scwrl_1Y7R.pdb
: